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SPRING 2006


Thursday February 9, 2006

Topic: Random Ellipsoids: Statistics for Diffusion Tensor Imaging Data


Speaker: Armin Schwartzman, Stanford University
Sponsor: Mathematics Department Colloquium
Time: 4:10 PM (refreshments served in TH 935 at 3:30 PM)
Place: Thornton Hall 211

 

Thursday February 9, 2006

Topic: Evolution of HIV Reverse Transcriptase in the Chimeric Virus RT-SHIV

Speaker: Dr. Deb Wadford, Postdoctoral Research Associate,
Public Health Microbiology II, CA Dept of Health Services
Sponsor: SFSU Colloquium in Microbiology, Cell and Molecular Biology sponsored by MARC/RISE programs
Time: 4:10 pm - Refreshments at 3:45pm
Place: SCI 210


Friday, February 10, 2006

Topic: Two Faculty Seminars

Dr. Nancy Gerber
Activation Mechanisms in Heme Proteins

Dr. Tomoko Komada
Dissolved Organic Matter in Marine Sediments: It's Oceanic and Global Significance

Sponsor: Chemistry and Biochemistry Department
Time: 12:10 pm
Place: Thornton Hall 327


Monday February 13, 2006

Topic: Black Holes: The Science behind the Science Fiction

Abstract: In this talk, I will begin by describing what black holes are (and what they are not!). I will then discuss how black holes are discovered and how they give rise to some of the most remarkable and energetic phenomena in the universe.

Speaker: Prof. Eliot Quataert, Astronomy Dept., Univ. of California, Berkeley
Sponsor: Physics and Astronomy Department
Time: 4:00 p.m.
Place: TH 411

Monday February 13, 2006

Topic: Population Intervention Models


ABSTRACT: Marginal structural models (MSM) provide a powerful tool forestimating the causal effect of a treatment or risk variable on the distribution of a disease outcome in a population. These models, as originally introduced by Robins (Robins, 1998; Robins, 2000), model the marginal distributions of treatment-specific counterfactual outcomes, possibly conditional on a subset of the baseline covariates. Marginal structural models are particularly useful in the context of longitudinal data structures, in which each subject's treatment and covariate history are measured over time, and an outcome is recorded at a final time point. In addition to the simpler, weighted regression approaches (inverse probability of treatment weighted estimators), more general (and robust) estimators have been developed and studied in detail for parameters of the distribution treatment-specific counterfactuals (Robins, 2000; Neugebauer and van der Laan, 2004; Yu and van der Laan, 2003). This talk concerns applications where one is interested in modeling the difference between a treatment-specific counterfactual population distribution of a disease outcome and the actual current population distribution of the same outcome. Relevant parameters describe the effect of a hypothetical intervention on a population, and therefore we refer to these models as population intervention models. Estimators have been developed for the effect on an intervention in terms of a difference of means, ratio in means (e.g., relative risk if the outcome is binary), a so called switch relative risk measured by the quantile-quantile function. In this talk, before introducing this new estimator, we discuss a philosophy of estimation of causal effects in observational studies.


Speaker: Alan Hubbard, UC Berkeley
Sponsor: Mathematics Department Colloquium
Time: 4:10 PM (refreshments served in TH 935 at 3:30 PM)
Place: Thornton Hall 211

 


Thursday February 16, 2006

Topic: Ethanol-Induced Virulence of Acinetobacter baumannii

Speaker: Dr. Michael Smith, Postdoctoral Fellow, Dept of Molecular,
Cellular, and Developmental Biology, Yale University
Sponsor: SFSU Colloquium in Microbiology, Cell and Molecular Biology sponsored by MARC/RISE programs
Time: 4:10 pm - Refreshments at 3:45pm
Place: SCI 210

Thursday February 16, 2006

Topic: Application of Multivariate Statistics in Modeling Ecosystem Processes


Speaker: Bahrem Momem, University of Maryland
Sponsor: Mathematics Department Colloquium
Time: 4:10 PM (refreshments served in TH 935 at 3:30 PM)
Place: Thornton Hall 211


Friday, February 17, 2006

Topic: Faculty Mini-presentation:

Dr. Raymond Esquerra
The role of nitric oxide physiology in diabetic pathogenesis

Sponsor: Chemistry and Biochemistry Department
Time: 12:10 pm
Place: Thornton Hall 327


Monday February 20, 2006

Topic: Models of Population Dynamics


Speaker: Elissa Schwartz, UCLA
Sponsor: Mathematics Department Colloquium
Time: 4:10 PM (refreshments served in TH 935 at 3:30 PM)
Place: Thornton Hall 211


Tuesday February 21, 2006

Topic: Algebraic Invariants of Manifolds


Speaker: Joseph Gubeladze, SFSU
Sponsor: Mathematics Dynamics Seminar
Time: 4:10 PM
Place: Thornton Hall 211


Friday, February 24, 2006

Topic: Design of GABA Aminotransferase and Selective Neuronal Nitric Oxide Synthase Inhibitors. Potential Treatments for Epilepsy, Drug Abuse, and Neurodegeneration

Speaker: Dr. Richard Silverman, Northwestern University
Sponsor: Chemistry and Biochemistry Department
Time: 12:10 pm
Place: Thornton Hall 327


Monday February 27, 2006

Topic: The Formation of the Earth and Moon - An Overview

Speaker: Dr. Eugenio Rivera, University of California, Santa Cruz and Lick Observatory
Sponsor: Physics and Astronomy Department
Time: 4:00 p.m.
Place: TH 411


Tuesday February 28, 2006

Topic: What is a foliation?


Speaker: Slobodan Simic
Sponsor: Mathematics Dynamics Seminar
Time: 4:10 PM
Place: Thornton Hall 211

Friday, March 3, 2006

Topic: Mitochondrial proteomics, aging and neurodegenerative disease

Speaker: Dr. Brad Gibson, Buck Institute on Aging
Sponsor: Chemistry and Biochemistry Department
Time: 12:10 pm
Place: Thornton Hall 327


Monday, March 6, 2006

Topic: Fierce forces and stunning speeds: the extreme lifestyle of mantis shrimp

Speaker: Sheila Patek, University of California, Berkeley
Sponsor: Romberg Tiburon Center
Time: Noon-1pm.
Place: RTC Bay Conference Center, 3152 Paradise Drive,Tiburon, CA 94920
rtcinfo@sfsu.edu (415) 338-6063

Directions: Click here.


Monday March 6, 2006

Topic: SCIENTIST AS DETECTIVE; LUIS ALVAREZ AND THE PYRAMID BURIAL CHAMBERS, THE JFK ASSASSINATION, AND THE END OF THE DINOSAURS

Abstract: Luis Alvarez (1911-1988) was one of the great experimental physicists of the twentieth century. He worked in nuclear physics in the 1930's, on radar and the atomic bomb in the '40's, on particle physics in the '50's and ''60's. He made many inventions, most of them involving radar, aircraft navigation and safety, and optics. He won the Nobel Prize in 1968 "for his decisive contributions to elementary particle physics, in particular the discovery of a large number of resonance states, made possible through his development of the technique of using the hydrogen bubble chamber and data analysis." But he will be best remembered for his crucial part in solving the mystery of what killed the dinosaurs and much of the rest of life 65 million years ago.

Speaker: Dr. Charles Wohl, Lawrence Berkeley National Laboratory
Sponsor: Physics and Astronomy Department
Time: 4:00 p.m.
Place: TH 411


Thursday March 9, 2006

Topic: Evolutionary Genomics: from Elephants to Viruses

Speaker: Dr. Alfred L. Roca, Scientist II,
Laboratory of Genomic Diversity, National Institutes of Health
Sponsor: SFSU Colloquium in Microbiology, Cell and Molecular Biology sponsored by MARC/RISE programs
Time: 4:10 pm - Refreshments at 3:45pm
Place: SCI 210


Friday, March 10, 2006

Topic: Effects of Crowding and Hydration on Protein Folding

Speaker: Dr. Daryl Eggers, San Jose State University
Sponsor: Chemistry and Biochemistry Department
Time: 12:10 pm
Place: Thornton Hall 327


Monday March 13, 2006

Topic: Lensing Probes of Dark Baryons and Dark Matter

Abstract: Gravitational lensing probes the matter content of the universe directly, without the bias of mass-to-light ratio. A wide variety of lensing techniques can be brought to bear to study dark matter (and dark baryons) directly. First: gravitational microlensing is a powerful tool for studying dark stellar-mass objects, including stellar remnants and even primordial black holes. It is known that roughly half of the baryons are missing in the local universe. These may reside in stellar remnants accessible to microlensing surveys and / or in a warm-hot intergalactic medium (WHIM). We discuss such surveys of the local group, local supercluster, and beyond. Second: strong lensing by galaxies and clusters, producing multiple images of background objects, directly probes the matter distribution of the lenses. We discuss preliminary work toward studying rare lens configurations that may appear in large samples of lenses. Such chance alignments are quite sensitive to the structure of the lenses, and may allow more detailed measurements of their properties.

Speaker: Dr. Edward Baltz, Stanford Linear Accelerator Center
Sponsor: Physics and Astronomy Department
Time: 4:00 p.m.
Place: TH 411


Tuesday March 14, 2006

Topic: Geometry and Topology of Surfaces


Speaker: Yitwah Cheung, SFSU
Sponsor: Mathematics Dynamics Seminar
Time: 4:10 PM
Place: Thornton Hall 211


Thursday March 16, 2006

Topic: Regulation of Adult Stem Cell Self Renewal and Differentiation

Speaker: Dr. Margaret Fuller, Professor of Developmental Biology and Genetics
Sponsor: SFSU Colloquium in Microbiology, Cell and Molecular Biology sponsored by MARC/RISE programs
Time: 4:10 pm - Refreshments at 3:45pm
Place: SCI 210


Friday, March 17, 2006

Topic: Rapid Screening of Toxic Elements Via Field-Portable X-Ray Fluorescence Spectrometry

Speaker: Dr. Peter Palmer, SFSU
Sponsor: Chemistry and Biochemistry Department
Time: 12:10 pm
Place: Thornton Hall 327


Monday, March 20, 2006

Topic: Poster Social

RTC scientist display posters they have presented at local, national, and international meetings.
Please join us to socialize and bring some food to share.


Sponsor: Romberg Tiburon Center
Time: Noon-1pm.
Place: RTC Bay Conference Center, 3152 Paradise Drive,Tiburon, CA 94920
rtcinfo@sfsu.edu (415) 338-6063

Directions: Click here.

 

Monday March 20, 2006

Topic: Rocky Worlds Orbiting Other Stars

Abstract: Rocky planets in general remain poorly understood, including their formation, orbital dynamics, interior structure, and their acquisition of volatiles such as water. Programs are underway to detect rocky exoplanets using both spaceborne and ground-based telescopes. Several planets under 20 Earth-masses have recently been detected. At Lick Observatory, construction has begun of the "Automated Planet Finder" telescope (APF) that will be dedicated to detecting planets under 20 Earth masses in tight orbits. It will determine their occurrence, masses, orbits, and possibly radii, including detectability of planets in the habitable zone around low mass stars..

Speaker: Dr. Geoffrey Marcy, Professor of Astronomy, Univ. of California, Berkeley and Adjunct Professor of Physics and Astronomy, SFSU
Sponsor: Physics and Astronomy Department
Time: 4:05 p.m.
Place: SPECIAL LOCATION - Science 210



Tuesday March 21, 2006

Topic: The Modular Surface


Speaker: Matthias Beck, SFSU
Sponsor: Mathematics Dynamics Seminar
Time: 4:10 PM
Place: Thornton Hall 211


 

Thursday March 23, 2006

Topic: Genomic Diversity and its Functional Effects in Natural Populations

Speaker: Dr. Douda Bensasson, Postdoctoral Fellow
Department of Biological Sciences, Imperial College London
Sponsor: SFSU Colloquium in Microbiology, Cell and Molecular Biology sponsored by MARC/RISE programs
Time: 4:10 pm - Refreshments at 3:45pm
Place: SCI 210


Monday March 27, 2006

Topic: Rocky Worlds Orbiting Other Stars

Speaker: Dr. Adrian Lee, UC Berkeley
Sponsor: Physics and Astronomy Department
Time: 4:05 p.m.
Place: TH 411



Thursday April 13, 2006

Topic: Analysis of Microarrays for the Study and Treatment of Cancer

Speaker: Dr. Thomas Wu, Senior Scientist
Dept. of Bioinformatics, Genentech
Sponsor: SFSU Colloquium in Microbiology, Cell and Molecular Biology sponsored by MARC/RISE programs
Time: 4:10 pm - Refreshments at 3:45pm
Place: SCI 210



Monday April 17, 2006

Topic: Ultrashort-Pulsed Solitons and the Revolution of Optical Clocks

Abstract: Recent breakthroughs using ultrashort-pulsed mode-locked lasers have revolutionized the field of frequency metrology, making optical clocks possible. In the past few years, the stability of optical clocks has surpassed that of the best atomic clocks. This progress has application to fundamental physics, such as measurement of variations in the fine-structure constant, and technology, such as GPS navigation. Control of the carrier-envelope phase slip of the pulses plays a key role in this breakthrough. We analyze the phase slip using a dispersion and nonlinearity-managed Nonlinear Schrodinger equation, which models pulse propagation in the laser cavity. A simple asymptotic formula is derived for the nonlinear phase slip, which is in excellent agreement with direct numerical simulations. Additionally, recent experiments using mode-locked Ti:sapphire lasers demonstrate remarkable agreement with theory.

Speaker: Prof. Boze Ilan, Physics Dept., University of California, Merced
Sponsor: Physics and Astronomy Department
Time: 4:00 p.m.
Place: TH 411


Wednesday April19, 2006

Topic: Why Do We Fight? A Game Theoretic Analysis

ABSTRACT: Fighting is endemic to our world. Animals fight primarily for food, mates, or territory. Humans, tribes, gangs, and nation-states fight for endless reasons over anything ranging from the possession of a valued asset to the setting of social norms. But why would rational actors fight when they could negotiate a settlement in peace? Bargaining under the threat or the actual imposition of violence is a central topic of game theory that assumes rational decision making. I will review some basic concepts of bargaining and game theory. I will then discuss some recent advances that offer new insights into why people and institutions prefer to fight rather than settle peacefully.


Speaker: Jean-Pierre P. Langlois, SFSU
Sponsor: Mathematics Department Colloquium
Time: 4:10 PM (refreshments served in TH 935 at 3:30 PM)
Place: Thornton Hall 211


Wednesday April 26, 2006

Topic: A proof of Sharkovsky's theorem

ABSTRACT: The talk will present Sharkovsky's remarkable theorem about periodic points of continous maps of the real line. The theorem is particularly interesting because its proof is surprisingly elementary. It requires nothing more than the intermediate value property of continuous functions. Sharkovsky's intial argument was long and complicated, but modern proofs are accessible to undergraduates and even high school students. The talk will outline what I believe is the clearest version of the proof so far developed. This is joint work with Boris Hasselblatt.


Speaker: Keith Burns, Northwestern University
Sponsor: Mathematics Department Colloquium
Time: 4:10 PM (refreshments served in TH 935 at 3:30 PM)
Place: Thornton Hall 211


Monday May 1, 2006

Topic: Ultrashort-Pulsed Solitons and the Revolution of Optical Clocks

Abstract:In the colloquium, I will set the stage for a discussion of a subset of fundamental-symmetry tests using the methods of atomic, molecular, and optical physics carried out by our group, including:

1. Measurement of parity violation in atomic ytterbium

2. Exploratory work towards a condensed-matter experiment searching for a parity- and time-reversal-violating nuclear Schiff moment

3. Search for temporal variation of the fine-structure "constant" with radio-frequency transitions in atomic dysprosium

4. Search for a small violation of Bose-Einstein statistics for photons in two-photon transitions in atomic barium

Speaker: Prof. Dmitry Budker, Physics Dept., Univ. of California, Berkeley
Sponsor: Physics and Astronomy Department
Time: 4:00 p.m.
Place: TH 411


 


Wednesday May 10, 2006

Topic: Modeling the Pheromone Signaling System in Yeast

Speaker: Joyce Macabea, UC Berkeley
Sponsor: Mathematics Department Colloquium
Time: 4:10 PM (refreshments served in TH 935 at 3:30 PM)
Place: Thornton Hall 211


Monday May 15, 2006

Topic: The Cosmic Landscape: String Theory and the Illusion of Intelligent Design

Abstract:Widely recognized as the father of string theory, Leonard Susskind will discuss his book - "The Cosmic Landscape: String Theory and the Illusion of Intelligent Design " (Little, Brown, & Co., 2006), which aims to reinvent our concept of the known universe and man's unique place within it.

The beginning of the 21st century is a watershed in modern science, a time that will forever change our understanding of the universe, Dr. Susskind contends.

Susskind introduced the revolutionary concept of string theory to the world of physical science. In doing so, he inspired a generation of physicists who believed that the theory would uniquely predict the properties of our universe. Now, Susskind argues that the very idea of such an "elegant theory" no longer suits our understanding of the universe, and that our narrow 20th-century view of a unique universe will have to give way to the much broader concept of a gigantic cosmic landscape: a megaverse, pregnant with new possibilities.

(The book is available at the SFSU Bookstore, and Dr. Susskind will likely be willing to autograph.).

Speaker: Dr. Leonard Susskind, Physics Dept., Stanford University
Sponsor: Physics and Astronomy Department
Time: 4:00 p.m.
Place: TH 411


 

 


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